BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035C03SP1|AL430018
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 1676 0.0
>3x_Contig1035
Length = 4175
Score = 1676 bits (845), Expect = 0.0
Identities = 908/919 (98%), Gaps = 10/919 (1%)
Strand = Plus / Minus
Query: 1 gatccaatgggacatggaaaattagatatatagggttgtcagactgtgggtagagtaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1933 gatccaatgggacatggaaaattagatatatagggttgtcagactgtgggtagagtaaac 1874
Query: 61 aatcgcgctgtccttgccagtcgaagtctctccctctctctttatctcttgagaaggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1873 aatcgcgctgtccttgccagtcgaagtctctccctctctctttatctcttgagaaggaca 1814
Query: 121 tctcgtcttcaaggtaagggaaaatcaaatatcacatttgacgaacattcaaatattatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1813 tctcgtcttcaaggtaagggaaaatcaaatatcacatttgacgaacattcaaatattatg 1754
Query: 181 tggtgtgctggtgtaaatgcatttattgtatgcaatgatggcttcaagcatgccaaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1753 tggtgtgctggtgtaaatgcatttattgtatgcaatgatggcttcaagcatgccaaatgg 1694
Query: 241 gtttaaatcaagtgattactgtctcgtattaattaattatttacgaaacaatttatatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1693 gtttaaatcaagtgattactgtctcgtattaattaattatttacgaaacaatttatatgg 1634
Query: 301 gctcttggaaccatactatcacctcaaatgcttcactttctgtcgtattgtattcgaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1633 gctcttggaaccatactatcacctcaaatgcttcactttctgtcgtattgtattcgaaca 1574
Query: 361 tcttccattcatatcacgtgactgaaaactcaaccactcacgtgaccgaacccaaagtgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1573 tcttccattcatatcacgtgactgaaaactcaaccactcacgtgaccgaacccaaagtgg 1514
Query: 421 caaaaaccgaattaataaggccaacaacctataaacaactacaaaccagtttccttaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 caaaaaccgaattaataaggccaacaacctataaacaactacaaaccagtttccttaaaa 1454
Query: 481 caacaatagcaacaagaagtgaaccgttcgttcattttgatcacattgcatcacaagtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 caacaatagcaacaagaagtgaaccgttcgttcattttgatcacattgcatcacaagtta 1394
Query: 541 gtatcagatatgacgaatattaaggttgatggcgaagaaattgacgagagcttgtactct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 gtatcagatatgacgaatattaaggttgatggcgaagaaattgacgagagcttgtactct 1334
Query: 601 cgtcaattgtacgtattag-gtaaagaagcgatgtt--aaagatgcaacattcgaacg-t 656
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |
Sbjct: 1333 cgtcaattgtacgtattagcgtaaagaagcgatgttcacaagatgcaacattcgaacgct 1274
Query: 657 tttgatcattgggttaaaaggtttaggtgtcg-agattgccaagaacg-ttgtctt--gg 712
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||
Sbjct: 1273 tttgatcattgggttaaaaggtttaggtgtcgcagattgccaagaacgcttgtcttcggg 1214
Query: 713 ccggtgttaagtctttaaccctttatgatccaa-gcgctgt-cgctttacaggatctttc 770
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1213 ccggtgttaagtctttaaccctttatgatccaatgcgctgtgcgctttacaggatctttc 1154
Query: 771 tacgcagtttttcctgtcagaacaagatattgggcaagctagagataaagtatcacaggc 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 tacgcagtttttcctgtcagaacaagatattgggcaagctagagataaagtatcacaggc 1094
Query: 831 aaaattagccgaattaaactcatacgtgccagtgaaggtgctagaggggctagaagacgt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 aaaattagccgaattaaactcatacgtgccagtgaaggtgctagaggggctagaagacgt 1034
Query: 891 gtcacaattgtctgaattc 909
|||||||||||||||||||
Sbjct: 1033 gtcacaattgtctgaattc 1015
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6550
Number of Sequences: 1807
Number of extensions: 6550
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)